Milestones

2012-10-05

Start researching Biopython. Read Presenter First paper.

2012-10-22

Test-driven command-line application which correctly finds CpG islands but doesn’t necessarily output them in a nice format.

2012-11-05

Basic graphical user interface with the ability to load files and run the analysis tool. The output will be the same as the command-line interface, but will be inside a text area in the graphical interface. Start writing research paper.

2012-11-19

Halfway done with research paper. Enhancements to the graphical user interface. Start speed optimization and Hidden Markov Models if time.

2012-12-03

Assumed project due date.